Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Pcdha11Q91Y19 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Pcdha11Q91Y19 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Gm4968-201ENSMUST00000071458 858 ntBASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Pcdha11Q91Y19 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Gm12441-201ENSMUST00000121806 588 ntBASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 AC160393.1-201ENSMUST00000218378 1279 ntBASIC19.52■□□□□ 0.72
Pcdha11Q91Y19 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdha11Q91Y19 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Pcdha11Q91Y19 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 Spcs1-207ENSMUST00000228767 1008 ntBASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Pcdha11Q91Y19 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Gm26524-201ENSMUST00000192339 390 ntBASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Pcdha11Q91Y19 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha11Q91Y19 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha11Q91Y19 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha11Q91Y19 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha11Q91Y19 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha11Q91Y19 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.49■□□□□ 0.71
Pcdha11Q91Y19 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.49■□□□□ 0.71
Pcdha11Q91Y19 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pcdha11Q91Y19 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 Gm43672-201ENSMUST00000199072 1731 ntBASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pcdha11Q91Y19 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 50.9 ms