Protein–RNA interactions for Protein: Q91Y16

Pcdha3, Protocadherin alpha 3, mousemouse

Predictions only

Length 942 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha3Q91Y16 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Pcdha3Q91Y16 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha3Q91Y16 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha3Q91Y16 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha3Q91Y16 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha3Q91Y16 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Pcdha3Q91Y16 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha3Q91Y16 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha3Q91Y16 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha3Q91Y16 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Pcdha3Q91Y16 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Pcdha3Q91Y16 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Pcdha3Q91Y16 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Pcdha3Q91Y16 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdha3Q91Y16 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Gm12933-201ENSMUST00000120203 872 ntBASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Pcdha3Q91Y16 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha3Q91Y16 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.36■□□□□ 0.69
Pcdha3Q91Y16 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha3Q91Y16 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.36■□□□□ 0.69
Pcdha3Q91Y16 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha3Q91Y16 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdha3Q91Y16 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms