Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb8Q91XZ2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.15■□□□□ 0.5
Pcdhb8Q91XZ2 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb8Q91XZ2 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.15■□□□□ 0.5
Pcdhb8Q91XZ2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdhb8Q91XZ2 Reep4-203ENSMUST00000226563 1444 ntBASIC18.15■□□□□ 0.5
Pcdhb8Q91XZ2 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb8Q91XZ2 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb8Q91XZ2 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb8Q91XZ2 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdhb8Q91XZ2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdhb8Q91XZ2 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdhb8Q91XZ2 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdhb8Q91XZ2 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Pcdhb8Q91XZ2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb8Q91XZ2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Pcdhb8Q91XZ2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb8Q91XZ2 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb8Q91XZ2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb8Q91XZ2 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb8Q91XZ2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.1■□□□□ 0.49
Pcdhb8Q91XZ2 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Pcdhb8Q91XZ2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Gm13146-201ENSMUST00000118508 780 ntBASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Pcdhb8Q91XZ2 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms