Protein–RNA interactions for Protein: Q91XX8

Pcdhgb1, Protocadherin gamma B1, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb1Q91XX8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhgb1Q91XX8 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhgb1Q91XX8 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhgb1Q91XX8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Rab3c-203ENSMUST00000224180 967 ntBASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhgb1Q91XX8 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Arhgap44-202ENSMUST00000093001 2256 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhgb1Q91XX8 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Gm19094-201ENSMUST00000209791 1246 ntBASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhgb1Q91XX8 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Pcdhgb1Q91XX8 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhgb1Q91XX8 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb1Q91XX8 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhgb1Q91XX8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhgb1Q91XX8 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms