Protein–RNA interactions for Protein: Q8VHQ4

Rab40c, Ras-related protein Rab-40C, mousemouse

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40cQ8VHQ4 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40cQ8VHQ4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Gm45102-201ENSMUST00000207427 857 ntBASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Gm37811-201ENSMUST00000192416 2601 ntBASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rab40cQ8VHQ4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Gm14117-201ENSMUST00000122417 843 ntBASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40cQ8VHQ4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40cQ8VHQ4 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40cQ8VHQ4 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Rab40cQ8VHQ4 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Rab40cQ8VHQ4 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 16.4 ms