Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retreg1dQ8VE91 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Gm13148-201ENSMUST00000118892 745 ntBASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Retreg1dQ8VE91 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Gm7290-201ENSMUST00000104990 617 ntBASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Gm12918-201ENSMUST00000120234 636 ntBASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Gm15710-201ENSMUST00000121821 636 ntBASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Gm3807-201ENSMUST00000193520 1168 ntBASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Gm5075-201ENSMUST00000196916 622 ntBASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Retreg1dQ8VE91 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retreg1dQ8VE91 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Gm12441-201ENSMUST00000121806 588 ntBASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retreg1dQ8VE91 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Golph3-205ENSMUST00000228671 2842 ntBASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Gm5408-201ENSMUST00000197998 747 ntBASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Retreg1dQ8VE91 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retreg1dQ8VE91 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms