Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Chrna3Q8R4G9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.25■□□□□ 0.51
Chrna3Q8R4G9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Chrna3Q8R4G9 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Gm5408-201ENSMUST00000197998 747 ntBASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Spcs1-207ENSMUST00000228767 1008 ntBASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Chrna3Q8R4G9 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Chrna3Q8R4G9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Gm12441-201ENSMUST00000121806 588 ntBASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Gm4968-201ENSMUST00000071458 858 ntBASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
Chrna3Q8R4G9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Chrna3Q8R4G9 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms