Protein–RNA interactions for Protein: Q8R2A7

Vmn1r228, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r228Q8R2A7 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Vmn1r228Q8R2A7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Gm43566-201ENSMUST00000196851 808 ntBASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Vmn1r228Q8R2A7 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
Vmn1r228Q8R2A7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
Vmn1r228Q8R2A7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r228Q8R2A7 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.14■□□□□ 0.17
Vmn1r228Q8R2A7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Vmn1r228Q8R2A7 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r228Q8R2A7 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r228Q8R2A7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Vmn1r228Q8R2A7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Vmn1r228Q8R2A7 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r228Q8R2A7 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r228Q8R2A7 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r228Q8R2A7 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r228Q8R2A7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r228Q8R2A7 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r228Q8R2A7 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r228Q8R2A7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r228Q8R2A7 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Vmn1r228Q8R2A7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Mir6538-201ENSMUST00000183713 110 ntBASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Gm42911-201ENSMUST00000199360 1630 ntBASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Vmn1r228Q8R2A7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Fst-202ENSMUST00000223640 2612 ntBASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.1■□□□□ 0.17
Vmn1r228Q8R2A7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Vmn1r228Q8R2A7 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Vmn1r228Q8R2A7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Vmn1r228Q8R2A7 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms