Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Nudcd3Q8R1N4 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Nudcd3Q8R1N4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nudcd3Q8R1N4 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Nudcd3Q8R1N4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Nudcd3Q8R1N4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
Nudcd3Q8R1N4 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nudcd3Q8R1N4 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.58■□□□□ 0.56
Nudcd3Q8R1N4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
Nudcd3Q8R1N4 Golgb1-201ENSMUST00000023534 498 ntBASIC18.58■□□□□ 0.56
Nudcd3Q8R1N4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nudcd3Q8R1N4 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nudcd3Q8R1N4 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Nudcd3Q8R1N4 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Nudcd3Q8R1N4 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC18.58■□□□□ 0.56
Nudcd3Q8R1N4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Gm42900-201ENSMUST00000197184 2167 ntBASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Nudcd3Q8R1N4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Nudcd3Q8R1N4 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Nudcd3Q8R1N4 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Nudcd3Q8R1N4 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Nudcd3Q8R1N4 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms