Protein–RNA interactions for Protein: Q8K558

Treml1, Trem-like transcript 1 protein, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Treml1Q8K558 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Treml1Q8K558 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Treml1Q8K558 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.34■□□□□ 0.53
Treml1Q8K558 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.34■□□□□ 0.53
Treml1Q8K558 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.34■□□□□ 0.53
Treml1Q8K558 Gm29257-201ENSMUST00000186115 639 ntBASIC18.34■□□□□ 0.53
Treml1Q8K558 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC18.34■□□□□ 0.53
Treml1Q8K558 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
Treml1Q8K558 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 BC021767-201ENSMUST00000126387 1716 ntBASIC18.34■□□□□ 0.53
Treml1Q8K558 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Treml1Q8K558 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Treml1Q8K558 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Treml1Q8K558 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Treml1Q8K558 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Treml1Q8K558 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Treml1Q8K558 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Treml1Q8K558 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Treml1Q8K558 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Treml1Q8K558 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.33■□□□□ 0.52
Treml1Q8K558 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Treml1Q8K558 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Treml1Q8K558 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Treml1Q8K558 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Treml1Q8K558 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Treml1Q8K558 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Treml1Q8K558 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Treml1Q8K558 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.32■□□□□ 0.52
Treml1Q8K558 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Treml1Q8K558 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Treml1Q8K558 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Treml1Q8K558 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Treml1Q8K558 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Treml1Q8K558 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Treml1Q8K558 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Treml1Q8K558 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Treml1Q8K558 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Treml1Q8K558 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Treml1Q8K558 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC18.31■□□□□ 0.52
Treml1Q8K558 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Treml1Q8K558 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Treml1Q8K558 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Treml1Q8K558 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Treml1Q8K558 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Treml1Q8K558 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Treml1Q8K558 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC18.3■□□□□ 0.52
Treml1Q8K558 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.3■□□□□ 0.52
Treml1Q8K558 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.3■□□□□ 0.52
Treml1Q8K558 Gm6365-201ENSMUST00000054711 744 ntBASIC18.3■□□□□ 0.52
Treml1Q8K558 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Treml1Q8K558 Gm43231-201ENSMUST00000202960 2258 ntBASIC18.3■□□□□ 0.52
Treml1Q8K558 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Treml1Q8K558 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Treml1Q8K558 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Treml1Q8K558 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.29■□□□□ 0.52
Treml1Q8K558 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.29■□□□□ 0.52
Treml1Q8K558 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.29■□□□□ 0.52
Treml1Q8K558 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Treml1Q8K558 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Treml1Q8K558 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Treml1Q8K558 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Treml1Q8K558 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Treml1Q8K558 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC18.28■□□□□ 0.52
Treml1Q8K558 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Treml1Q8K558 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Treml1Q8K558 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Treml1Q8K558 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Treml1Q8K558 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Treml1Q8K558 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Treml1Q8K558 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Treml1Q8K558 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Treml1Q8K558 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Treml1Q8K558 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Treml1Q8K558 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Treml1Q8K558 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Treml1Q8K558 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Treml1Q8K558 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.27■□□□□ 0.52
Treml1Q8K558 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
Treml1Q8K558 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms