Protein–RNA interactions for Protein: Q8K4L0

Ddx54, ATP-dependent RNA helicase DDX54, mousemouse

Known RBP Predictions only

Length 874 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx54Q8K4L0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 Gm37292-201ENSMUST00000192062 758 ntBASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
Ddx54Q8K4L0 Gm45560-201ENSMUST00000211492 1472 ntBASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Gm12382-201ENSMUST00000122005 922 ntBASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 AC159205.3-201ENSMUST00000224614 874 ntBASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC24.51■■□□□ 1.51
Ddx54Q8K4L0 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Zfp783-201ENSMUST00000095946 670 ntBASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
Ddx54Q8K4L0 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx54Q8K4L0 Gm15375-201ENSMUST00000119510 849 ntBASIC24.49■■□□□ 1.51
Ddx54Q8K4L0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx54Q8K4L0 Gm18032-201ENSMUST00000222541 538 ntBASIC24.49■■□□□ 1.51
Ddx54Q8K4L0 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx54Q8K4L0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
Ddx54Q8K4L0 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Ddx54Q8K4L0 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
Ddx54Q8K4L0 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Snhg20-203ENSMUST00000182811 2153 ntBASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC24.46■■□□□ 1.51
Ddx54Q8K4L0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.51
Ddx54Q8K4L0 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC24.45■■□□□ 1.51
Ddx54Q8K4L0 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx54Q8K4L0 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx54Q8K4L0 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx54Q8K4L0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC24.45■■□□□ 1.5
Ddx54Q8K4L0 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC24.45■■□□□ 1.5
Ddx54Q8K4L0 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx54Q8K4L0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
Ddx54Q8K4L0 Gm12504-201ENSMUST00000120860 2231 ntBASIC24.45■■□□□ 1.5
Ddx54Q8K4L0 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
Ddx54Q8K4L0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
Ddx54Q8K4L0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx54Q8K4L0 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx54Q8K4L0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Ddx54Q8K4L0 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC24.43■■□□□ 1.5
Ddx54Q8K4L0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC24.43■■□□□ 1.5
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms