Protein–RNA interactions for Protein: Q8K2T8

Paf1, RNA polymerase II-associated factor 1 homolog, mousemouse

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Paf1Q8K2T8 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
Paf1Q8K2T8 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Paf1Q8K2T8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Paf1Q8K2T8 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC21.77■■□□□ 1.08
Paf1Q8K2T8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Paf1Q8K2T8 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Paf1Q8K2T8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Paf1Q8K2T8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Paf1Q8K2T8 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Paf1Q8K2T8 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Paf1Q8K2T8 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC21.77■■□□□ 1.07
Paf1Q8K2T8 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Paf1Q8K2T8 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Gm10167-201ENSMUST00000150411 1479 ntBASIC21.76■■□□□ 1.07
Paf1Q8K2T8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Paf1Q8K2T8 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Paf1Q8K2T8 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC21.74■■□□□ 1.07
Paf1Q8K2T8 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 Rncr4-201ENSMUST00000194541 2234 ntBASIC21.73■■□□□ 1.07
Paf1Q8K2T8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Paf1Q8K2T8 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Gm37179-201ENSMUST00000194862 823 ntBASIC21.72■■□□□ 1.07
Paf1Q8K2T8 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Paf1Q8K2T8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Gm9885-202ENSMUST00000186234 2209 ntBASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Paf1Q8K2T8 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Paf1Q8K2T8 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Paf1Q8K2T8 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Paf1Q8K2T8 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Paf1Q8K2T8 Gm15853-202ENSMUST00000195518 2041 ntBASIC21.7■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms