Protein–RNA interactions for Protein: Q8JZS7

Hmgcll1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcll1Q8JZS7 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgcll1Q8JZS7 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Hmgcll1Q8JZS7 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Hmgcll1Q8JZS7 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Hmgcll1Q8JZS7 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcll1Q8JZS7 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcll1Q8JZS7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Hmgcll1Q8JZS7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.2■□□□□ 0.66
Hmgcll1Q8JZS7 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.2■□□□□ 0.66
Hmgcll1Q8JZS7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcll1Q8JZS7 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcll1Q8JZS7 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcll1Q8JZS7 Gm12896-201ENSMUST00000118430 226 ntBASIC19.19■□□□□ 0.66
Hmgcll1Q8JZS7 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
Hmgcll1Q8JZS7 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcll1Q8JZS7 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcll1Q8JZS7 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcll1Q8JZS7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcll1Q8JZS7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Hmgcll1Q8JZS7 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcll1Q8JZS7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Trmt13-210ENSMUST00000198454 880 ntBASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Gm2559-201ENSMUST00000201323 363 ntBASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Dio3-201ENSMUST00000097228 1449 ntBASIC19.17■□□□□ 0.66
Hmgcll1Q8JZS7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcll1Q8JZS7 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Gm27275-201ENSMUST00000184318 272 ntBASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcll1Q8JZS7 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 AC140264.2-202ENSMUST00000218746 817 ntBASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.14■□□□□ 0.65
Hmgcll1Q8JZS7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms