Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Syne4Q8CII8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Syne4Q8CII8 Gm43183-201ENSMUST00000200632 547 ntBASIC21.17■□□□□ 0.98
Syne4Q8CII8 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syne4Q8CII8 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syne4Q8CII8 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Syne4Q8CII8 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Syne4Q8CII8 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syne4Q8CII8 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syne4Q8CII8 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Syne4Q8CII8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syne4Q8CII8 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.16■□□□□ 0.98
Syne4Q8CII8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syne4Q8CII8 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syne4Q8CII8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syne4Q8CII8 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syne4Q8CII8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syne4Q8CII8 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Syne4Q8CII8 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC21.16■□□□□ 0.98
Syne4Q8CII8 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Syne4Q8CII8 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Syne4Q8CII8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Syne4Q8CII8 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Syne4Q8CII8 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Syne4Q8CII8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Syne4Q8CII8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Syne4Q8CII8 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC21.15■□□□□ 0.98
Syne4Q8CII8 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC21.15■□□□□ 0.98
Syne4Q8CII8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Syne4Q8CII8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Syne4Q8CII8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Syne4Q8CII8 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Syne4Q8CII8 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.14■□□□□ 0.98
Syne4Q8CII8 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syne4Q8CII8 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Syne4Q8CII8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syne4Q8CII8 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC21.14■□□□□ 0.97
Syne4Q8CII8 Gm30025-201ENSMUST00000218555 728 ntBASIC21.14■□□□□ 0.97
Syne4Q8CII8 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syne4Q8CII8 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Syne4Q8CII8 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Syne4Q8CII8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syne4Q8CII8 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Syne4Q8CII8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Syne4Q8CII8 Gm8668-201ENSMUST00000120559 1447 ntBASIC21.12■□□□□ 0.97
Syne4Q8CII8 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Arhgef4-208ENSMUST00000211073 171 ntBASIC21.12■□□□□ 0.97
Syne4Q8CII8 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Syne4Q8CII8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Syne4Q8CII8 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syne4Q8CII8 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC21.11■□□□□ 0.97
Syne4Q8CII8 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC21.11■□□□□ 0.97
Syne4Q8CII8 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC21.11■□□□□ 0.97
Syne4Q8CII8 Gm21814-202ENSMUST00000203277 873 ntBASIC21.11■□□□□ 0.97
Syne4Q8CII8 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Syne4Q8CII8 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Syne4Q8CII8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.11■□□□□ 0.97
Syne4Q8CII8 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Syne4Q8CII8 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syne4Q8CII8 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syne4Q8CII8 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Syne4Q8CII8 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC21.1■□□□□ 0.97
Syne4Q8CII8 Zfp783-201ENSMUST00000095946 670 ntBASIC21.1■□□□□ 0.97
Syne4Q8CII8 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syne4Q8CII8 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syne4Q8CII8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syne4Q8CII8 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Syne4Q8CII8 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.1■□□□□ 0.97
Syne4Q8CII8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Syne4Q8CII8 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Syne4Q8CII8 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Syne4Q8CII8 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC21.09■□□□□ 0.97
Syne4Q8CII8 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Syne4Q8CII8 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Syne4Q8CII8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.09■□□□□ 0.97
Syne4Q8CII8 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Syne4Q8CII8 Gm16042-201ENSMUST00000204813 1247 ntBASIC21.09■□□□□ 0.97
Syne4Q8CII8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC21.09■□□□□ 0.97
Syne4Q8CII8 AC124581.1-201ENSMUST00000225416 1399 ntBASIC21.09■□□□□ 0.97
Syne4Q8CII8 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms