Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Reep4-203ENSMUST00000226563 1444 ntBASIC18.67■□□□□ 0.58
Clip4Q8CI96 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.67■□□□□ 0.58
Clip4Q8CI96 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Gm10849-201ENSMUST00000100397 618 ntBASIC18.67■□□□□ 0.58
Clip4Q8CI96 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.67■□□□□ 0.58
Clip4Q8CI96 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Clip4Q8CI96 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Clip4Q8CI96 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip4Q8CI96 Gm13234-201ENSMUST00000120010 747 ntBASIC18.65■□□□□ 0.58
Clip4Q8CI96 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.65■□□□□ 0.58
Clip4Q8CI96 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.65■□□□□ 0.58
Clip4Q8CI96 CT030146.1-201ENSMUST00000220919 217 ntBASIC18.65■□□□□ 0.58
Clip4Q8CI96 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Clip4Q8CI96 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip4Q8CI96 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip4Q8CI96 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Clip4Q8CI96 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip4Q8CI96 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Clip4Q8CI96 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Clip4Q8CI96 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Clip4Q8CI96 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Clip4Q8CI96 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Clip4Q8CI96 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clip4Q8CI96 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC18.64■□□□□ 0.57
Clip4Q8CI96 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Clip4Q8CI96 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip4Q8CI96 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Clip4Q8CI96 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.64■□□□□ 0.57
Clip4Q8CI96 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.64■□□□□ 0.57
Clip4Q8CI96 AV356131-201ENSMUST00000206201 750 ntBASIC18.64■□□□□ 0.57
Clip4Q8CI96 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip4Q8CI96 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
Clip4Q8CI96 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip4Q8CI96 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip4Q8CI96 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.64■□□□□ 0.57
Clip4Q8CI96 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
Clip4Q8CI96 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Gm27405-201ENSMUST00000184201 112 ntBASIC18.63■□□□□ 0.57
Clip4Q8CI96 Gm7291-201ENSMUST00000199147 382 ntBASIC18.63■□□□□ 0.57
Clip4Q8CI96 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.63■□□□□ 0.57
Clip4Q8CI96 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Clip4Q8CI96 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Clip4Q8CI96 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
Clip4Q8CI96 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clip4Q8CI96 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clip4Q8CI96 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clip4Q8CI96 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clip4Q8CI96 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clip4Q8CI96 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clip4Q8CI96 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clip4Q8CI96 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Clip4Q8CI96 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Clip4Q8CI96 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.61■□□□□ 0.57
Clip4Q8CI96 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.61■□□□□ 0.57
Clip4Q8CI96 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms