Protein–RNA interactions for Protein: Q8CI71

Vps50, Syndetin, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps50Q8CI71 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Vps50Q8CI71 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Vps50Q8CI71 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps50Q8CI71 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC18.22■□□□□ 0.51
Vps50Q8CI71 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps50Q8CI71 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps50Q8CI71 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Vps50Q8CI71 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Rarb-207ENSMUST00000225921 2756 ntBASIC18.21■□□□□ 0.51
Vps50Q8CI71 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Vps50Q8CI71 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Vps50Q8CI71 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Vps50Q8CI71 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC18.2■□□□□ 0.5
Vps50Q8CI71 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Gm27801-201ENSMUST00000184174 223 ntBASIC18.2■□□□□ 0.5
Vps50Q8CI71 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Vps50Q8CI71 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC18.19■□□□□ 0.5
Vps50Q8CI71 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.19■□□□□ 0.5
Vps50Q8CI71 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Vps50Q8CI71 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Vps50Q8CI71 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps50Q8CI71 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps50Q8CI71 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
Vps50Q8CI71 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC18.18■□□□□ 0.5
Vps50Q8CI71 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps50Q8CI71 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps50Q8CI71 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps50Q8CI71 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Vps50Q8CI71 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Vps50Q8CI71 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Gm7291-201ENSMUST00000199147 382 ntBASIC18.17■□□□□ 0.5
Vps50Q8CI71 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps50Q8CI71 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC18.17■□□□□ 0.5
Vps50Q8CI71 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Vps50Q8CI71 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Gm27405-201ENSMUST00000184201 112 ntBASIC18.16■□□□□ 0.5
Vps50Q8CI71 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.16■□□□□ 0.5
Vps50Q8CI71 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Vps50Q8CI71 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Vps50Q8CI71 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Vps50Q8CI71 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms