Protein–RNA interactions for Protein: Q8CH19

Csnka2ip, Casein kinase II subunit alpha'-interacting protein, mousemouse

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnka2ipQ8CH19 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
Csnka2ipQ8CH19 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.54■□□□□ 0.4
Csnka2ipQ8CH19 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Csnka2ipQ8CH19 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.54■□□□□ 0.4
Csnka2ipQ8CH19 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Csnka2ipQ8CH19 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Csnka2ipQ8CH19 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Csnka2ipQ8CH19 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Csnka2ipQ8CH19 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Csnka2ipQ8CH19 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Gm5408-201ENSMUST00000197998 747 ntBASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Csnka2ipQ8CH19 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Csnka2ipQ8CH19 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.52■□□□□ 0.39
Csnka2ipQ8CH19 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Csnka2ipQ8CH19 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Csnka2ipQ8CH19 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Gm10653-202ENSMUST00000139570 835 ntBASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.49■□□□□ 0.39
Csnka2ipQ8CH19 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Csnka2ipQ8CH19 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Csnka2ipQ8CH19 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Csnka2ipQ8CH19 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Csnka2ipQ8CH19 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms