Protein–RNA interactions for Protein: Q8CGM2

Rp1l1, Retinitis pigmentosa 1-like 1 protein, mousemouse

Predictions only

Length 1,859 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rp1l1Q8CGM2 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC19.58■□□□□ 0.73
Rp1l1Q8CGM2 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.58■□□□□ 0.73
Rp1l1Q8CGM2 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rp1l1Q8CGM2 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rp1l1Q8CGM2 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rp1l1Q8CGM2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rp1l1Q8CGM2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rp1l1Q8CGM2 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rp1l1Q8CGM2 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.58■□□□□ 0.72
Rp1l1Q8CGM2 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rp1l1Q8CGM2 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rp1l1Q8CGM2 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Gm10138-203ENSMUST00000206952 366 ntBASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rp1l1Q8CGM2 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.55■□□□□ 0.72
Rp1l1Q8CGM2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rp1l1Q8CGM2 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC19.54■□□□□ 0.72
Rp1l1Q8CGM2 Gm33142-201ENSMUST00000193913 867 ntBASIC19.54■□□□□ 0.72
Rp1l1Q8CGM2 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rp1l1Q8CGM2 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rp1l1Q8CGM2 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rp1l1Q8CGM2 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rp1l1Q8CGM2 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rp1l1Q8CGM2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rp1l1Q8CGM2 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC19.53■□□□□ 0.72
Rp1l1Q8CGM2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rp1l1Q8CGM2 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.53■□□□□ 0.72
Rp1l1Q8CGM2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rp1l1Q8CGM2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rp1l1Q8CGM2 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
Rp1l1Q8CGM2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC19.53■□□□□ 0.72
Rp1l1Q8CGM2 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rp1l1Q8CGM2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rp1l1Q8CGM2 Gm10013-201ENSMUST00000106074 672 ntBASIC19.52■□□□□ 0.72
Rp1l1Q8CGM2 Gm18959-201ENSMUST00000208954 655 ntBASIC19.52■□□□□ 0.72
Rp1l1Q8CGM2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rp1l1Q8CGM2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.52■□□□□ 0.72
Rp1l1Q8CGM2 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rp1l1Q8CGM2 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rp1l1Q8CGM2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rp1l1Q8CGM2 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rp1l1Q8CGM2 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rp1l1Q8CGM2 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rp1l1Q8CGM2 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rp1l1Q8CGM2 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rp1l1Q8CGM2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rp1l1Q8CGM2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rp1l1Q8CGM2 AC159205.6-201ENSMUST00000224935 887 ntBASIC19.51■□□□□ 0.71
Rp1l1Q8CGM2 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rp1l1Q8CGM2 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rp1l1Q8CGM2 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rp1l1Q8CGM2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Gm45640-201ENSMUST00000210665 1896 ntBASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rp1l1Q8CGM2 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rp1l1Q8CGM2 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Rp1l1Q8CGM2 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Rp1l1Q8CGM2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rp1l1Q8CGM2 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rp1l1Q8CGM2 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms