Protein–RNA interactions for Protein: Q8CDW1

Fam228a, Protein FAM228A, mousemouse

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam228aQ8CDW1 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.53■□□□□ 0.72
Fam228aQ8CDW1 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam228aQ8CDW1 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam228aQ8CDW1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam228aQ8CDW1 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Fam228aQ8CDW1 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam228aQ8CDW1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC19.52■□□□□ 0.72
Fam228aQ8CDW1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam228aQ8CDW1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Fam228aQ8CDW1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
Fam228aQ8CDW1 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Fam228aQ8CDW1 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Fam228aQ8CDW1 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.51■□□□□ 0.71
Fam228aQ8CDW1 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.5■□□□□ 0.71
Fam228aQ8CDW1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Gm42922-201ENSMUST00000195887 2078 ntBASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Fam228aQ8CDW1 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Fam228aQ8CDW1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam228aQ8CDW1 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam228aQ8CDW1 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam228aQ8CDW1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam228aQ8CDW1 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Fam228aQ8CDW1 Gm7860-201ENSMUST00000121190 879 ntBASIC19.47■□□□□ 0.71
Fam228aQ8CDW1 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.47■□□□□ 0.71
Fam228aQ8CDW1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Fam228aQ8CDW1 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms