Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC29.19■■■□□ 2.26
Pabpn1Q8CCS6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
Pabpn1Q8CCS6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC29.19■■■□□ 2.26
Pabpn1Q8CCS6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC29.18■■■□□ 2.26
Pabpn1Q8CCS6 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC29.17■■■□□ 2.26
Pabpn1Q8CCS6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pabpn1Q8CCS6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Pabpn1Q8CCS6 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
Pabpn1Q8CCS6 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pabpn1Q8CCS6 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Pabpn1Q8CCS6 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC29.17■■■□□ 2.26
Pabpn1Q8CCS6 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Mir3081-201ENSMUST00000175305 84 ntBASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Mir6349-201ENSMUST00000184059 97 ntBASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC29.16■■■□□ 2.26
Pabpn1Q8CCS6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Gm28659-201ENSMUST00000188013 759 ntBASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Gm43073-201ENSMUST00000198200 1189 ntBASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Gm17808-201ENSMUST00000200859 894 ntBASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 AC132104.2-201ENSMUST00000215011 266 ntBASIC29.15■■■□□ 2.26
Pabpn1Q8CCS6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pabpn1Q8CCS6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC29.14■■■□□ 2.26
Pabpn1Q8CCS6 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC29.14■■■□□ 2.26
Pabpn1Q8CCS6 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Pabpn1Q8CCS6 Gm27357-201ENSMUST00000183754 135 ntBASIC29.14■■■□□ 2.26
Pabpn1Q8CCS6 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC29.14■■■□□ 2.26
Pabpn1Q8CCS6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC29.14■■■□□ 2.26
Pabpn1Q8CCS6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Pabpn1Q8CCS6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC29.14■■■□□ 2.26
Pabpn1Q8CCS6 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC29.14■■■□□ 2.25
Pabpn1Q8CCS6 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC29.14■■■□□ 2.25
Pabpn1Q8CCS6 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 Gm21559-201ENSMUST00000220638 855 ntBASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 Gm8587-201ENSMUST00000076538 843 ntBASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC29.13■■■□□ 2.25
Pabpn1Q8CCS6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC29.12■■■□□ 2.25
Pabpn1Q8CCS6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Pabpn1Q8CCS6 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pabpn1Q8CCS6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC29.12■■■□□ 2.25
Pabpn1Q8CCS6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pabpn1Q8CCS6 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC29.12■■■□□ 2.25
Pabpn1Q8CCS6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
Pabpn1Q8CCS6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Pabpn1Q8CCS6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Pabpn1Q8CCS6 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC29.11■■■□□ 2.25
Pabpn1Q8CCS6 Gm34391-201ENSMUST00000203706 907 ntBASIC29.11■■■□□ 2.25
Pabpn1Q8CCS6 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC29.11■■■□□ 2.25
Pabpn1Q8CCS6 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC29.11■■■□□ 2.25
Pabpn1Q8CCS6 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
Pabpn1Q8CCS6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pabpn1Q8CCS6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pabpn1Q8CCS6 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pabpn1Q8CCS6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC29.1■■■□□ 2.25
Pabpn1Q8CCS6 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pabpn1Q8CCS6 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pabpn1Q8CCS6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pabpn1Q8CCS6 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
Pabpn1Q8CCS6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Pabpn1Q8CCS6 Gm16061-201ENSMUST00000122167 857 ntBASIC29.09■■■□□ 2.25
Pabpn1Q8CCS6 Gm38027-201ENSMUST00000192315 235 ntBASIC29.09■■■□□ 2.25
Pabpn1Q8CCS6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pabpn1Q8CCS6 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pabpn1Q8CCS6 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pabpn1Q8CCS6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
Pabpn1Q8CCS6 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pabpn1Q8CCS6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC29.08■■■□□ 2.25
Pabpn1Q8CCS6 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC29.08■■■□□ 2.25
Pabpn1Q8CCS6 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
Pabpn1Q8CCS6 Gm38285-201ENSMUST00000192928 922 ntBASIC29.08■■■□□ 2.25
Pabpn1Q8CCS6 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
Retrieved 100 of 76,532 protein–RNA pairs in 262 ms