Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Ccdc60Q8C4J0 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.39
Ccdc60Q8C4J0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc60Q8C4J0 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Ccdc60Q8C4J0 Gm6365-201ENSMUST00000054711 744 ntBASIC23.76■■□□□ 1.39
Ccdc60Q8C4J0 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Ccdc60Q8C4J0 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Ccdc60Q8C4J0 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Ccdc60Q8C4J0 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
Ccdc60Q8C4J0 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
Ccdc60Q8C4J0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Ccdc60Q8C4J0 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc60Q8C4J0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc60Q8C4J0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Ccdc60Q8C4J0 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc60Q8C4J0 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Ccdc60Q8C4J0 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc60Q8C4J0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc60Q8C4J0 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC23.7■■□□□ 1.38
Ccdc60Q8C4J0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc60Q8C4J0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Ccdc60Q8C4J0 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC23.69■■□□□ 1.38
Ccdc60Q8C4J0 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 222.2 ms