Protein–RNA interactions for Protein: Q8C166

Cpne1, Copine-1, mousemouse

Predictions only

Length 536 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne1Q8C166 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
Cpne1Q8C166 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.36■□□□□ 0.37
Cpne1Q8C166 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Cpne1Q8C166 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Gm27405-201ENSMUST00000184201 112 ntBASIC17.35■□□□□ 0.37
Cpne1Q8C166 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Cpne1Q8C166 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
Cpne1Q8C166 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Gm6420-201ENSMUST00000193885 723 ntBASIC17.34■□□□□ 0.37
Cpne1Q8C166 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.34■□□□□ 0.37
Cpne1Q8C166 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
Cpne1Q8C166 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne1Q8C166 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne1Q8C166 BC021767-201ENSMUST00000126387 1716 ntBASIC17.33■□□□□ 0.37
Cpne1Q8C166 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne1Q8C166 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne1Q8C166 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne1Q8C166 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne1Q8C166 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
Cpne1Q8C166 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Cpne1Q8C166 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.33■□□□□ 0.36
Cpne1Q8C166 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.33■□□□□ 0.36
Cpne1Q8C166 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Cpne1Q8C166 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne1Q8C166 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.32■□□□□ 0.36
Cpne1Q8C166 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Nespas-201ENSMUST00000143738 1083 ntBASIC17.32■□□□□ 0.36
Cpne1Q8C166 Gm7291-201ENSMUST00000199147 382 ntBASIC17.32■□□□□ 0.36
Cpne1Q8C166 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Cpne1Q8C166 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms