Protein–RNA interactions for Protein: Q8BXQ3

Lrtm1, Leucine-rich repeat and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrtm1Q8BXQ3 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Lrtm1Q8BXQ3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Lrtm1Q8BXQ3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
Lrtm1Q8BXQ3 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Gm13148-201ENSMUST00000118892 745 ntBASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Gm6365-201ENSMUST00000054711 744 ntBASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Lrtm1Q8BXQ3 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Gm43231-201ENSMUST00000202960 2258 ntBASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.22■□□□□ 0.19
Lrtm1Q8BXQ3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Lrtm1Q8BXQ3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Lrtm1Q8BXQ3 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Lrtm1Q8BXQ3 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.6 ms