Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Ube3dQ8BX13 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Gm45640-201ENSMUST00000210665 1896 ntBASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 CT030146.1-201ENSMUST00000220919 217 ntBASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Ube3dQ8BX13 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC16.45■□□□□ 0.22
Ube3dQ8BX13 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ube3dQ8BX13 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Gm18688-201ENSMUST00000204695 1859 ntBASIC16.44■□□□□ 0.22
Ube3dQ8BX13 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ube3dQ8BX13 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Gm7514-201ENSMUST00000209475 934 ntBASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ube3dQ8BX13 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms