Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rd3Q8BRE0 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rd3Q8BRE0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Gm6576-201ENSMUST00000169678 883 ntBASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Rd3Q8BRE0 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.7■□□□□ 0.74
Rd3Q8BRE0 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.7■□□□□ 0.74
Rd3Q8BRE0 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Gm18666-201ENSMUST00000190039 958 ntBASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rd3Q8BRE0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rd3Q8BRE0 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rd3Q8BRE0 Gm29241-201ENSMUST00000189260 1096 ntBASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms