Protein–RNA interactions for Protein: Q8BR65

Suds3, Sin3 histone deacetylase corepressor complex component SDS3, mousemouse

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Suds3Q8BR65 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Suds3Q8BR65 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Suds3Q8BR65 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Reep4-203ENSMUST00000226563 1444 ntBASIC19.01■□□□□ 0.63
Suds3Q8BR65 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Gm29257-201ENSMUST00000186115 639 ntBASIC19.01■□□□□ 0.63
Suds3Q8BR65 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC19.01■□□□□ 0.63
Suds3Q8BR65 CT030146.1-201ENSMUST00000220919 217 ntBASIC19.01■□□□□ 0.63
Suds3Q8BR65 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Suds3Q8BR65 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Suds3Q8BR65 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Suds3Q8BR65 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Suds3Q8BR65 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Suds3Q8BR65 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Suds3Q8BR65 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Suds3Q8BR65 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19■□□□□ 0.63
Suds3Q8BR65 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Suds3Q8BR65 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Suds3Q8BR65 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Suds3Q8BR65 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Suds3Q8BR65 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19■□□□□ 0.63
Suds3Q8BR65 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Suds3Q8BR65 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Suds3Q8BR65 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Suds3Q8BR65 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Gm7291-201ENSMUST00000199147 382 ntBASIC18.98■□□□□ 0.63
Suds3Q8BR65 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.98■□□□□ 0.63
Suds3Q8BR65 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Suds3Q8BR65 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Suds3Q8BR65 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Suds3Q8BR65 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Suds3Q8BR65 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Suds3Q8BR65 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Suds3Q8BR65 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Suds3Q8BR65 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Suds3Q8BR65 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Suds3Q8BR65 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Suds3Q8BR65 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.97■□□□□ 0.63
Suds3Q8BR65 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Suds3Q8BR65 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Suds3Q8BR65 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Suds3Q8BR65 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms