Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 BC021767-201ENSMUST00000126387 1716 ntBASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cpsf4Q8BQZ5 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Gm42778-201ENSMUST00000199644 553 ntBASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Gm42569-201ENSMUST00000200539 472 ntBASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Cpsf4Q8BQZ5 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4Q8BQZ5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4Q8BQZ5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4Q8BQZ5 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4Q8BQZ5 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4Q8BQZ5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4Q8BQZ5 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4Q8BQZ5 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4Q8BQZ5 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cpsf4Q8BQZ5 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cpsf4Q8BQZ5 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 AC164629.5-201ENSMUST00000220387 632 ntBASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cpsf4Q8BQZ5 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Gm18671-201ENSMUST00000214826 683 ntBASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cpsf4Q8BQZ5 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cpsf4Q8BQZ5 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Gm13234-201ENSMUST00000120010 747 ntBASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 Gm7291-201ENSMUST00000199147 382 ntBASIC17.97■□□□□ 0.47
Cpsf4Q8BQZ5 AV356131-201ENSMUST00000206201 750 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms