Protein–RNA interactions for Protein: Q8BP27

Sfr1, Swi5-dependent recombination DNA repair protein 1 homolog, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sfr1Q8BP27 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sfr1Q8BP27 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sfr1Q8BP27 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sfr1Q8BP27 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.83■□□□□ 0.61
Sfr1Q8BP27 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sfr1Q8BP27 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Sfr1Q8BP27 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sfr1Q8BP27 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sfr1Q8BP27 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sfr1Q8BP27 Rarb-207ENSMUST00000225921 2756 ntBASIC18.83■□□□□ 0.6
Sfr1Q8BP27 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.83■□□□□ 0.6
Sfr1Q8BP27 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sfr1Q8BP27 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sfr1Q8BP27 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sfr1Q8BP27 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sfr1Q8BP27 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sfr1Q8BP27 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Gm19094-201ENSMUST00000209791 1246 ntBASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sfr1Q8BP27 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sfr1Q8BP27 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sfr1Q8BP27 Gm12933-201ENSMUST00000120203 872 ntBASIC18.8■□□□□ 0.6
Sfr1Q8BP27 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.8■□□□□ 0.6
Sfr1Q8BP27 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sfr1Q8BP27 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Sfr1Q8BP27 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sfr1Q8BP27 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sfr1Q8BP27 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Gm7290-201ENSMUST00000104990 617 ntBASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Gm12918-201ENSMUST00000120234 636 ntBASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Gm15710-201ENSMUST00000121821 636 ntBASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Gm5075-201ENSMUST00000196916 622 ntBASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sfr1Q8BP27 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Gm6365-201ENSMUST00000054711 744 ntBASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sfr1Q8BP27 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms