Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Chmp2bQ8BJF9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Gm43173-201ENSMUST00000202246 593 ntBASIC19■□□□□ 0.63
Chmp2bQ8BJF9 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19■□□□□ 0.63
Chmp2bQ8BJF9 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Gm8493-201ENSMUST00000196881 489 ntBASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Wdr70-203ENSMUST00000227371 1130 ntBASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.99■□□□□ 0.63
Chmp2bQ8BJF9 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp2bQ8BJF9 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp2bQ8BJF9 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp2bQ8BJF9 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp2bQ8BJF9 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp2bQ8BJF9 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp2bQ8BJF9 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Chmp2bQ8BJF9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Gm27801-201ENSMUST00000184174 223 ntBASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Chmp2bQ8BJF9 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
Chmp2bQ8BJF9 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Chmp2bQ8BJF9 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Chmp2bQ8BJF9 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms