Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Tdp1Q8BJ37 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 Gm9484-201ENSMUST00000195892 1159 ntBASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 AC107452.1-201ENSMUST00000227963 481 ntBASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Tdp1Q8BJ37 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Gm13836-201ENSMUST00000121159 501 ntBASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.58■□□□□ 0.89
Tdp1Q8BJ37 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Tdp1Q8BJ37 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tdp1Q8BJ37 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tdp1Q8BJ37 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Tdp1Q8BJ37 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Gm15565-201ENSMUST00000118890 427 ntBASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Gm37055-201ENSMUST00000191866 133 ntBASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Tdp1Q8BJ37 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tdp1Q8BJ37 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Tdp1Q8BJ37 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Tdp1Q8BJ37 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tdp1Q8BJ37 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tdp1Q8BJ37 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Tdp1Q8BJ37 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Tdp1Q8BJ37 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Mtag2-201ENSMUST00000058665 714 ntBASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tdp1Q8BJ37 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tdp1Q8BJ37 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tdp1Q8BJ37 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms