Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.93■□□□□ 0.46
Trim23Q8BGX0 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Gm4968-201ENSMUST00000071458 858 ntBASIC17.92■□□□□ 0.46
Trim23Q8BGX0 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trim23Q8BGX0 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Gm26524-201ENSMUST00000192339 390 ntBASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Trim23Q8BGX0 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trim23Q8BGX0 BC021767-201ENSMUST00000126387 1716 ntBASIC17.89■□□□□ 0.46
Trim23Q8BGX0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trim23Q8BGX0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trim23Q8BGX0 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trim23Q8BGX0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms