Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC17.55■□□□□ 0.4
Atg4bQ8BGE6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Atg4bQ8BGE6 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Nespas-201ENSMUST00000143738 1083 ntBASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Atg4bQ8BGE6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atg4bQ8BGE6 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atg4bQ8BGE6 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atg4bQ8BGE6 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atg4bQ8BGE6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Atg4bQ8BGE6 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atg4bQ8BGE6 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Atg4bQ8BGE6 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Atg4bQ8BGE6 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Atg4bQ8BGE6 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.52■□□□□ 0.39
Atg4bQ8BGE6 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Atg4bQ8BGE6 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atg4bQ8BGE6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Atg4bQ8BGE6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atg4bQ8BGE6 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Atg4bQ8BGE6 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Atg4bQ8BGE6 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Atg4bQ8BGE6 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Atg4bQ8BGE6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms