Protein–RNA interactions for Protein: Q811I0

Atpaf1, ATP synthase mitochondrial F1 complex assembly factor 1, mousemouse

Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atpaf1Q811I0 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Atpaf1Q811I0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Atpaf1Q811I0 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Atpaf1Q811I0 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Atpaf1Q811I0 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC15.21■□□□□ 0.02
Atpaf1Q811I0 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Atpaf1Q811I0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
Atpaf1Q811I0 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Gm16464-201ENSMUST00000117815 1095 ntBASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Gm5067-201ENSMUST00000170449 1009 ntBASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Gm10399-202ENSMUST00000202768 748 ntBASIC15.2■□□□□ 0.02
Atpaf1Q811I0 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Atpaf1Q811I0 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
Atpaf1Q811I0 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Gm8969-201ENSMUST00000199694 526 ntBASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Atpaf1Q811I0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Atpaf1Q811I0 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms