Protein–RNA interactions for Protein: Q810A7

Ddx42, ATP-dependent RNA helicase DDX42, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx42Q810A7 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.8■□□□□ 0.6
Ddx42Q810A7 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx42Q810A7 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx42Q810A7 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ddx42Q810A7 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.79■□□□□ 0.6
Ddx42Q810A7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Ddx42Q810A7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx42Q810A7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx42Q810A7 Gm45244-201ENSMUST00000211328 2200 ntBASIC18.78■□□□□ 0.6
Ddx42Q810A7 Gm5898-201ENSMUST00000121016 2071 ntBASIC18.78■□□□□ 0.6
Ddx42Q810A7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx42Q810A7 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx42Q810A7 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx42Q810A7 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx42Q810A7 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.78■□□□□ 0.6
Ddx42Q810A7 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ddx42Q810A7 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx42Q810A7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx42Q810A7 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ddx42Q810A7 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx42Q810A7 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx42Q810A7 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx42Q810A7 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx42Q810A7 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx42Q810A7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx42Q810A7 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx42Q810A7 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx42Q810A7 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Ddx42Q810A7 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.77■□□□□ 0.6
Ddx42Q810A7 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx42Q810A7 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Ddx42Q810A7 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.76■□□□□ 0.59
Ddx42Q810A7 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Ddx42Q810A7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.75■□□□□ 0.59
Ddx42Q810A7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Gm10493-201ENSMUST00000097270 612 ntBASIC18.75■□□□□ 0.59
Ddx42Q810A7 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Ddx42Q810A7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Ddx42Q810A7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Ddx42Q810A7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx42Q810A7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx42Q810A7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx42Q810A7 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx42Q810A7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx42Q810A7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx42Q810A7 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Ddx42Q810A7 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Ddx42Q810A7 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.73■□□□□ 0.59
Ddx42Q810A7 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.73■□□□□ 0.59
Ddx42Q810A7 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms