Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnrc18Q80WC3 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnrc18Q80WC3 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.76■□□□□ 0.59
Tnrc18Q80WC3 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tnrc18Q80WC3 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tnrc18Q80WC3 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Tnrc18Q80WC3 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.76■□□□□ 0.59
Tnrc18Q80WC3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnrc18Q80WC3 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tnrc18Q80WC3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 Gm7712-202ENSMUST00000222331 1510 ntBASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tnrc18Q80WC3 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 AC154471.1-201ENSMUST00000224418 436 ntBASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tnrc18Q80WC3 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Gm18032-201ENSMUST00000222541 538 ntBASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 Mtag2-201ENSMUST00000058665 714 ntBASIC18.73■□□□□ 0.59
Tnrc18Q80WC3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Tnrc18Q80WC3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Tnrc18Q80WC3 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnrc18Q80WC3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC18.7■□□□□ 0.58
Tnrc18Q80WC3 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Tnrc18Q80WC3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.7■□□□□ 0.58
Tnrc18Q80WC3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Tnrc18Q80WC3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.7■□□□□ 0.58
Tnrc18Q80WC3 Gm45640-201ENSMUST00000210665 1896 ntBASIC18.7■□□□□ 0.58
Tnrc18Q80WC3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
Tnrc18Q80WC3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 AA414768-201ENSMUST00000121924 1257 ntBASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Tnrc18Q80WC3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnrc18Q80WC3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnrc18Q80WC3 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC18.68■□□□□ 0.58
Tnrc18Q80WC3 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnrc18Q80WC3 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnrc18Q80WC3 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Tnrc18Q80WC3 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.68■□□□□ 0.58
Tnrc18Q80WC3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Tnrc18Q80WC3 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms