Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Dio3-201ENSMUST00000097228 1449 ntBASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Sh3tc2Q80VA5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Sh3tc2Q80VA5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3tc2Q80VA5 Gm15565-201ENSMUST00000118890 427 ntBASIC20.21■□□□□ 0.83
Sh3tc2Q80VA5 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.21■□□□□ 0.83
Sh3tc2Q80VA5 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3tc2Q80VA5 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Sh3tc2Q80VA5 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Sh3tc2Q80VA5 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Sh3tc2Q80VA5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc2Q80VA5 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc2Q80VA5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc2Q80VA5 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc2Q80VA5 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc2Q80VA5 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc2Q80VA5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Sh3tc2Q80VA5 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Gm10616-201ENSMUST00000205285 2127 ntBASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Gm11249-201ENSMUST00000117071 859 ntBASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC20.17■□□□□ 0.82
Sh3tc2Q80VA5 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Gm10698-201ENSMUST00000182663 604 ntBASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Sh3tc2Q80VA5 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc2Q80VA5 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.15■□□□□ 0.82
Sh3tc2Q80VA5 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc2Q80VA5 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Sh3tc2Q80VA5 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Sh3tc2Q80VA5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms