Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sh3d21Q7TSG5 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
Sh3d21Q7TSG5 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3d21Q7TSG5 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3d21Q7TSG5 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3d21Q7TSG5 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC20.35■□□□□ 0.85
Sh3d21Q7TSG5 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3d21Q7TSG5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3d21Q7TSG5 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Sh3d21Q7TSG5 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Sh3d21Q7TSG5 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Sh3d21Q7TSG5 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3d21Q7TSG5 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Sh3d21Q7TSG5 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3d21Q7TSG5 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3d21Q7TSG5 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3d21Q7TSG5 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Sh3d21Q7TSG5 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.33■□□□□ 0.85
Sh3d21Q7TSG5 Gm10033-202ENSMUST00000211874 928 ntBASIC20.33■□□□□ 0.85
Sh3d21Q7TSG5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Sh3d21Q7TSG5 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Sh3d21Q7TSG5 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3d21Q7TSG5 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.33■□□□□ 0.84
Sh3d21Q7TSG5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
Sh3d21Q7TSG5 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3d21Q7TSG5 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3d21Q7TSG5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3d21Q7TSG5 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Sh3d21Q7TSG5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Sh3d21Q7TSG5 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 BC021767-201ENSMUST00000126387 1716 ntBASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Sh3d21Q7TSG5 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Sh3d21Q7TSG5 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Sh3d21Q7TSG5 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms