Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.68■□□□□ 0.42
Otub1Q7TQI3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otub1Q7TQI3 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otub1Q7TQI3 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otub1Q7TQI3 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otub1Q7TQI3 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otub1Q7TQI3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Otub1Q7TQI3 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otub1Q7TQI3 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Otub1Q7TQI3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Otub1Q7TQI3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Gm27801-201ENSMUST00000184174 223 ntBASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.66■□□□□ 0.42
Otub1Q7TQI3 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Otub1Q7TQI3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Otub1Q7TQI3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Otub1Q7TQI3 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Gm2011-201ENSMUST00000203124 1263 ntBASIC17.64■□□□□ 0.41
Otub1Q7TQI3 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Otub1Q7TQI3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Gm43060-201ENSMUST00000200621 289 ntBASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Otub1Q7TQI3 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Gm7860-201ENSMUST00000121190 879 ntBASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Otub1Q7TQI3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC17.61■□□□□ 0.41
Otub1Q7TQI3 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms