Protein–RNA interactions for Protein: Q7TQA3

Sdr16c5, Epidermal retinol dehydrogenase 2, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdr16c5Q7TQA3 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Sdr16c5Q7TQA3 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Sdr16c5Q7TQA3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
Sdr16c5Q7TQA3 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.34■□□□□ 0.53
Sdr16c5Q7TQA3 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Sdr16c5Q7TQA3 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdr16c5Q7TQA3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdr16c5Q7TQA3 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Sdr16c5Q7TQA3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Sdr16c5Q7TQA3 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Sdr16c5Q7TQA3 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.33■□□□□ 0.52
Sdr16c5Q7TQA3 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.33■□□□□ 0.52
Sdr16c5Q7TQA3 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.33■□□□□ 0.52
Sdr16c5Q7TQA3 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Sdr16c5Q7TQA3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.33■□□□□ 0.52
Sdr16c5Q7TQA3 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.33■□□□□ 0.52
Sdr16c5Q7TQA3 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC18.32■□□□□ 0.52
Sdr16c5Q7TQA3 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Sdr16c5Q7TQA3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Sdr16c5Q7TQA3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Gm38205-201ENSMUST00000192243 258 ntBASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
Sdr16c5Q7TQA3 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Gm12441-201ENSMUST00000121806 588 ntBASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Gm27032-201ENSMUST00000183124 1116 ntBASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Sdr16c5Q7TQA3 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.27■□□□□ 0.52
Sdr16c5Q7TQA3 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Sdr16c5Q7TQA3 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Sdr16c5Q7TQA3 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Sdr16c5Q7TQA3 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms