Protein–RNA interactions for Protein: Q7TPM3

Trim17, E3 ubiquitin-protein ligase TRIM17, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17Q7TPM3 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Trim17Q7TPM3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim17Q7TPM3 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim17Q7TPM3 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim17Q7TPM3 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim17Q7TPM3 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Trim17Q7TPM3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.24■□□□□ 0.67
Trim17Q7TPM3 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Trim17Q7TPM3 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Trim17Q7TPM3 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Trim17Q7TPM3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Gm18666-201ENSMUST00000190039 958 ntBASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Trim17Q7TPM3 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Trim17Q7TPM3 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim17Q7TPM3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim17Q7TPM3 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim17Q7TPM3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Trim17Q7TPM3 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC19.2■□□□□ 0.66
Trim17Q7TPM3 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim17Q7TPM3 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Trim17Q7TPM3 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trim17Q7TPM3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trim17Q7TPM3 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim17Q7TPM3 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.17■□□□□ 0.66
Trim17Q7TPM3 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.17■□□□□ 0.66
Trim17Q7TPM3 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trim17Q7TPM3 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC19.17■□□□□ 0.66
Trim17Q7TPM3 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim17Q7TPM3 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim17Q7TPM3 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim17Q7TPM3 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim17Q7TPM3 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trim17Q7TPM3 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms