Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.13■□□□□ 0.49
Scn4bQ7M729 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.13■□□□□ 0.49
Scn4bQ7M729 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.13■□□□□ 0.49
Scn4bQ7M729 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn4bQ7M729 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn4bQ7M729 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Gm26971-201ENSMUST00000182423 1072 ntBASIC18.12■□□□□ 0.49
Scn4bQ7M729 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Gm5874-201ENSMUST00000096101 508 ntBASIC18.12■□□□□ 0.49
Scn4bQ7M729 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
Scn4bQ7M729 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn4bQ7M729 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn4bQ7M729 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn4bQ7M729 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn4bQ7M729 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.11■□□□□ 0.49
Scn4bQ7M729 Gm42778-201ENSMUST00000199644 553 ntBASIC18.11■□□□□ 0.49
Scn4bQ7M729 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn4bQ7M729 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn4bQ7M729 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn4bQ7M729 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn4bQ7M729 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn4bQ7M729 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn4bQ7M729 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Scn4bQ7M729 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC18.08■□□□□ 0.49
Scn4bQ7M729 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn4bQ7M729 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn4bQ7M729 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Scn4bQ7M729 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.08■□□□□ 0.48
Scn4bQ7M729 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Gm8495-201ENSMUST00000188740 694 ntBASIC18.08■□□□□ 0.48
Scn4bQ7M729 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Scn4bQ7M729 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Scn4bQ7M729 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn4bQ7M729 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn4bQ7M729 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn4bQ7M729 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Scn4bQ7M729 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn4bQ7M729 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn4bQ7M729 Gm10167-201ENSMUST00000150411 1479 ntBASIC18.07■□□□□ 0.48
Scn4bQ7M729 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Scn4bQ7M729 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Scn4bQ7M729 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn4bQ7M729 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn4bQ7M729 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn4bQ7M729 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC18.06■□□□□ 0.48
Scn4bQ7M729 Gm13534-201ENSMUST00000121169 513 ntBASIC18.06■□□□□ 0.48
Scn4bQ7M729 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Scn4bQ7M729 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
Scn4bQ7M729 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms