Protein–RNA interactions for Protein: Q7M6Y2

Sox11, Transcription factor SOX-11, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox11Q7M6Y2 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox11Q7M6Y2 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.82■□□□□ 0.6
Sox11Q7M6Y2 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.82■□□□□ 0.6
Sox11Q7M6Y2 AC130671.1-201ENSMUST00000227384 1237 ntBASIC18.82■□□□□ 0.6
Sox11Q7M6Y2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox11Q7M6Y2 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox11Q7M6Y2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox11Q7M6Y2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox11Q7M6Y2 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Gm11249-201ENSMUST00000117071 859 ntBASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Gm11643-201ENSMUST00000119578 864 ntBASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox11Q7M6Y2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Gm10698-201ENSMUST00000182663 604 ntBASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox11Q7M6Y2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Mir1199-201ENSMUST00000117015 119 ntBASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Gm15378-201ENSMUST00000121894 207 ntBASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox11Q7M6Y2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 Nrn1-203ENSMUST00000223611 1443 ntBASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox11Q7M6Y2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox11Q7M6Y2 Gm6802-201ENSMUST00000167843 1983 ntBASIC18.77■□□□□ 0.59
Sox11Q7M6Y2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox11Q7M6Y2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sox11Q7M6Y2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox11Q7M6Y2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox11Q7M6Y2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox11Q7M6Y2 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox11Q7M6Y2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Sox11Q7M6Y2 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms