Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cspg5Q71M36 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cspg5Q71M36 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Gm12896-201ENSMUST00000118430 226 ntBASIC19.19■□□□□ 0.66
Cspg5Q71M36 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg5Q71M36 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cspg5Q71M36 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Gm37563-201ENSMUST00000192580 1513 ntBASIC19.18■□□□□ 0.66
Cspg5Q71M36 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cspg5Q71M36 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Rab3c-203ENSMUST00000224180 967 ntBASIC19.17■□□□□ 0.66
Cspg5Q71M36 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cspg5Q71M36 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Gm7860-201ENSMUST00000121190 879 ntBASIC19.16■□□□□ 0.66
Cspg5Q71M36 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Gm26524-201ENSMUST00000192339 390 ntBASIC19.16■□□□□ 0.66
Cspg5Q71M36 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.16■□□□□ 0.66
Cspg5Q71M36 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Cspg5Q71M36 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg5Q71M36 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cspg5Q71M36 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.15■□□□□ 0.66
Cspg5Q71M36 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Cspg5Q71M36 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Cspg5Q71M36 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms