Protein–RNA interactions for Protein: Q6ZQ88

Kdm1a, Lysine-specific histone demethylase 1A, mousemouse

Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Kdm1aQ6ZQ88 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm1aQ6ZQ88 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm1aQ6ZQ88 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm1aQ6ZQ88 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm1aQ6ZQ88 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Kdm1aQ6ZQ88 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Kdm1aQ6ZQ88 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm1aQ6ZQ88 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm1aQ6ZQ88 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Kdm1aQ6ZQ88 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Kdm1aQ6ZQ88 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1aQ6ZQ88 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1aQ6ZQ88 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.55■□□□□ 0.88
Kdm1aQ6ZQ88 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1aQ6ZQ88 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Kdm1aQ6ZQ88 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 CT010467.1-202ENSMUST00000205406 714 ntBASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Kdm1aQ6ZQ88 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Reep4-203ENSMUST00000226563 1444 ntBASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Kdm1aQ6ZQ88 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Kdm1aQ6ZQ88 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm1aQ6ZQ88 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm1aQ6ZQ88 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm1aQ6ZQ88 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm1aQ6ZQ88 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.51■□□□□ 0.87
Kdm1aQ6ZQ88 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Kdm1aQ6ZQ88 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.51■□□□□ 0.87
Kdm1aQ6ZQ88 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Kdm1aQ6ZQ88 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Kdm1aQ6ZQ88 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms