Protein–RNA interactions for Protein: Q6S5L9

Shc4, SHC-transforming protein 4, mousemouse

Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shc4Q6S5L9 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 AC131586.2-201ENSMUST00000228370 1512 ntBASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Shc4Q6S5L9 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Shc4Q6S5L9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Shc4Q6S5L9 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shc4Q6S5L9 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.33■□□□□ 0.37
Shc4Q6S5L9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shc4Q6S5L9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Shc4Q6S5L9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Shc4Q6S5L9 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.37
Shc4Q6S5L9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Shc4Q6S5L9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shc4Q6S5L9 Gm12527-201ENSMUST00000117967 564 ntBASIC17.33■□□□□ 0.36
Shc4Q6S5L9 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.33■□□□□ 0.36
Shc4Q6S5L9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Shc4Q6S5L9 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.33■□□□□ 0.36
Shc4Q6S5L9 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Shc4Q6S5L9 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Shc4Q6S5L9 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Shc4Q6S5L9 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Gm22240-201ENSMUST00000175225 82 ntBASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Gm8520-201ENSMUST00000186517 868 ntBASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Shc4Q6S5L9 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shc4Q6S5L9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Shc4Q6S5L9 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Shc4Q6S5L9 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms