Protein–RNA interactions for Protein: Q6PE55

Pdgfrl, Platelet-derived growth factor receptor-like protein, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrlQ6PE55 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
PdgfrlQ6PE55 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 AC107452.1-201ENSMUST00000227963 481 ntBASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 AC126028.2-201ENSMUST00000228100 1833 ntBASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PdgfrlQ6PE55 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
PdgfrlQ6PE55 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Gm715-201ENSMUST00000117865 831 ntBASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 AC158538.1-201ENSMUST00000225870 294 ntBASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PdgfrlQ6PE55 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Gm11927-201ENSMUST00000118472 759 ntBASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PdgfrlQ6PE55 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PdgfrlQ6PE55 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
PdgfrlQ6PE55 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrlQ6PE55 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.16■□□□□ 0.66
PdgfrlQ6PE55 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrlQ6PE55 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrlQ6PE55 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrlQ6PE55 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PdgfrlQ6PE55 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms