Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Rnf220Q6PDX6 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Mir6236-201ENSMUST00000184437 123 ntBASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Gm43530-201ENSMUST00000195920 274 ntBASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Gm9870-201ENSMUST00000063874 645 ntBASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Gm15853-202ENSMUST00000195518 2041 ntBASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Rnf220Q6PDX6 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Gm15820-201ENSMUST00000201566 728 ntBASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Rnf220Q6PDX6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Gm5812-201ENSMUST00000061073 957 ntBASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Rnf220Q6PDX6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 AC124603.1-201ENSMUST00000223843 308 ntBASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Rnf220Q6PDX6 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Rnf220Q6PDX6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Rnf220Q6PDX6 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms