Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ShbQ6PD21 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShbQ6PD21 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShbQ6PD21 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShbQ6PD21 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ShbQ6PD21 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShbQ6PD21 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ShbQ6PD21 Gm45058-201ENSMUST00000205810 766 ntBASIC20.35■□□□□ 0.85
ShbQ6PD21 AC159205.3-201ENSMUST00000224614 874 ntBASIC20.35■□□□□ 0.85
ShbQ6PD21 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.35■□□□□ 0.85
ShbQ6PD21 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
ShbQ6PD21 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ShbQ6PD21 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ShbQ6PD21 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
ShbQ6PD21 Gm12382-201ENSMUST00000122005 922 ntBASIC20.34■□□□□ 0.85
ShbQ6PD21 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.34■□□□□ 0.85
ShbQ6PD21 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShbQ6PD21 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShbQ6PD21 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
ShbQ6PD21 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShbQ6PD21 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ShbQ6PD21 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ShbQ6PD21 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ShbQ6PD21 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ShbQ6PD21 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ShbQ6PD21 Gm18101-201ENSMUST00000215769 548 ntBASIC20.33■□□□□ 0.85
ShbQ6PD21 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShbQ6PD21 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ShbQ6PD21 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ShbQ6PD21 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ShbQ6PD21 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ShbQ6PD21 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShbQ6PD21 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShbQ6PD21 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ShbQ6PD21 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ShbQ6PD21 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.31■□□□□ 0.84
ShbQ6PD21 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ShbQ6PD21 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
ShbQ6PD21 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
ShbQ6PD21 Gm38285-201ENSMUST00000192928 922 ntBASIC20.31■□□□□ 0.84
ShbQ6PD21 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ShbQ6PD21 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
ShbQ6PD21 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ShbQ6PD21 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ShbQ6PD21 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ShbQ6PD21 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShbQ6PD21 Gm5540-201ENSMUST00000131852 1848 ntBASIC20.3■□□□□ 0.84
ShbQ6PD21 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.3■□□□□ 0.84
ShbQ6PD21 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ShbQ6PD21 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShbQ6PD21 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ShbQ6PD21 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ShbQ6PD21 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC20.3■□□□□ 0.84
ShbQ6PD21 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC20.3■□□□□ 0.84
ShbQ6PD21 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ShbQ6PD21 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShbQ6PD21 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ShbQ6PD21 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ShbQ6PD21 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 Gm8309-201ENSMUST00000206627 1448 ntBASIC20.29■□□□□ 0.84
ShbQ6PD21 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
ShbQ6PD21 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ShbQ6PD21 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ShbQ6PD21 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ShbQ6PD21 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShbQ6PD21 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShbQ6PD21 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
ShbQ6PD21 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ShbQ6PD21 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC20.28■□□□□ 0.84
ShbQ6PD21 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC20.28■□□□□ 0.84
ShbQ6PD21 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ShbQ6PD21 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ShbQ6PD21 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ShbQ6PD21 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ShbQ6PD21 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ShbQ6PD21 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC20.27■□□□□ 0.84
ShbQ6PD21 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ShbQ6PD21 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.27■□□□□ 0.84
ShbQ6PD21 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ShbQ6PD21 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ShbQ6PD21 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ShbQ6PD21 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ShbQ6PD21 Gm14859-201ENSMUST00000117752 357 ntBASIC20.26■□□□□ 0.83
ShbQ6PD21 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC20.26■□□□□ 0.83
ShbQ6PD21 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
ShbQ6PD21 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.26■□□□□ 0.83
ShbQ6PD21 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.26■□□□□ 0.83
ShbQ6PD21 AC154471.1-201ENSMUST00000224418 436 ntBASIC20.26■□□□□ 0.83
ShbQ6PD21 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC20.26■□□□□ 0.83
ShbQ6PD21 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ShbQ6PD21 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.26■□□□□ 0.83
ShbQ6PD21 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms