Protein–RNA interactions for Protein: Q6PCX9

Trim37, E3 ubiquitin-protein ligase TRIM37, mousemouse

Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim37Q6PCX9 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Trim37Q6PCX9 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Trim37Q6PCX9 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Trim37Q6PCX9 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Trim37Q6PCX9 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim37Q6PCX9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim37Q6PCX9 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim37Q6PCX9 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Trim37Q6PCX9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC20.58■□□□□ 0.89
Trim37Q6PCX9 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.58■□□□□ 0.89
Trim37Q6PCX9 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Trim37Q6PCX9 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trim37Q6PCX9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.58■□□□□ 0.88
Trim37Q6PCX9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Trim37Q6PCX9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Trim37Q6PCX9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trim37Q6PCX9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim37Q6PCX9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Trim37Q6PCX9 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim37Q6PCX9 Gm12896-201ENSMUST00000118430 226 ntBASIC20.56■□□□□ 0.88
Trim37Q6PCX9 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.56■□□□□ 0.88
Trim37Q6PCX9 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
Trim37Q6PCX9 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trim37Q6PCX9 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Trim37Q6PCX9 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim37Q6PCX9 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Trim37Q6PCX9 Gm13534-201ENSMUST00000121169 513 ntBASIC20.55■□□□□ 0.88
Trim37Q6PCX9 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.55■□□□□ 0.88
Trim37Q6PCX9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim37Q6PCX9 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trim37Q6PCX9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.54■□□□□ 0.88
Trim37Q6PCX9 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Gm9987-201ENSMUST00000069768 567 ntBASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Trim37Q6PCX9 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trim37Q6PCX9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC20.52■□□□□ 0.88
Trim37Q6PCX9 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.52■□□□□ 0.88
Trim37Q6PCX9 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trim37Q6PCX9 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trim37Q6PCX9 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Trim37Q6PCX9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Trim37Q6PCX9 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trim37Q6PCX9 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Trim37Q6PCX9 Gm37055-201ENSMUST00000191866 133 ntBASIC20.51■□□□□ 0.87
Trim37Q6PCX9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.51■□□□□ 0.87
Trim37Q6PCX9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms