Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Gm7514-201ENSMUST00000209475 934 ntBASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Herc4Q6PAV2 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Gm26571-201ENSMUST00000181399 666 ntBASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.56■□□□□ 0.88
Herc4Q6PAV2 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Herc4Q6PAV2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Gm10167-201ENSMUST00000150411 1479 ntBASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Herc4Q6PAV2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.54■□□□□ 0.88
Herc4Q6PAV2 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herc4Q6PAV2 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herc4Q6PAV2 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herc4Q6PAV2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Herc4Q6PAV2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Herc4Q6PAV2 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Herc4Q6PAV2 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Herc4Q6PAV2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Gm6420-201ENSMUST00000193885 723 ntBASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Gm10655-201ENSMUST00000098658 1397 ntBASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Herc4Q6PAV2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Gm6627-201ENSMUST00000218299 2386 ntBASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Gm42569-201ENSMUST00000200539 472 ntBASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Herc4Q6PAV2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
Herc4Q6PAV2 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Gm10849-201ENSMUST00000100397 618 ntBASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Herc4Q6PAV2 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms